Explore projects
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Federated EGA Nextcloud Transport script, to transcode from the vault to an external Nextcloud instance
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Variant Interaction Analysis (VIA) is an application for identifying genomic variant interactions related with complex diseases. It uses Multifactor Dimensionality Dimension (MDR), a non-parametric statistical method for detecting and characterizing nonlinear interactions. It runs in a singularity container using Apache Spark for distributing the work, Hadoop File System for distributing the data and Apache ZooKeeper for synchronization. It is coded in Python.
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Project to light a Beacon v2 with cBIoPortal data
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Data intensive science for everyone.
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OEB administration and migration tools
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Variant Interaction Analysis workload for running in RISC-V. It includes logs from already performed runs.
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Python library to access FlowMaps database. Based on pymongo. Needs a direct connection to the Mongodb instance.
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FASTA to SAM/BAM/CRAM generator. Tool for generating alignment files (SAM/BAM/CRAM) from FASTA files
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