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The Asynchronous Low-level Programming Interface (ALPI) between tasking runtime systems and external task-aware libraries

OpenEBench MongoDB tools

Variant Interaction Analysis (VIA) is an application for identifying genomic variant interactions related with complex diseases. It uses Multifactor Dimensionality Dimension (MDR), a non-parametric statistical method for detecting and characterizing nonlinear interactions. It runs in a singularity container using Apache Spark for distributing the work, Hadoop File System for distributing the data and Apache ZooKeeper for synchronization. It is coded in Python.

Project to light a Beacon v2 with cBIoPortal data

Personal overlay used for my INB computers

Java NoSQL Beacon v2 implementation

This git repository is used to store bi-weekly slide presentations and other documents related to the progress on the PhD student, Francis Fuentes.