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Helm project for k8s execution with compss

BSC workflow manager and molecular visualizer

Documentation for the reference implementation provided by IMPaCT-Data, to be published in the ReadTheDocs platform

Pre- and Post-processing tools

Variant Interaction Analysis (VIA) is an application for identifying genomic variant interactions related with complex diseases. It uses Multifactor Dimensionality Dimension (MDR), a non-parametric statistical method for detecting and characterizing nonlinear interactions. It runs in a singularity container using Apache Spark for distributing the work, Hadoop File System for distributing the data and Apache ZooKeeper for synchronization. It is coded in Python.