* docs: add warning for QAPA build mode

* docs: update participant table

* docs: rename example out files

* docs: add singularity installation note

* docs: add metric name equality requirement

* docs: execution workflow input specs

* docs: update contact info

* docs: remove hackathon specific stuff

* docs: use benchmarked method

* docs: move license info to the end

* docs: update links

* docs: benchmark new tool

* docs: extend benchmarks

* docs: update overview

* docs: remove extensive instructions

* docs: update links

* docs: fix headers

* docs: fix spec link

* docs: note on using ewfs

* docs: update section on conda

* docs: replace "execution" wf with "method" wf

* docs: remove challenge code specs

* docs: replace summary_workflows with benchmarking_

* docs: update outfile naming reqs

* docs: use biocontainers, not apaeval dockerhub

* docs: replace summary_workflow with benchmarking_

* docs: remove param_code

* docs: replace swf with bwf

* docs: update sample overview

* docs: some more linking

* docs: update instructions for nf config and run

* docs: more linking

* docs: remove bwf template, link to absquant bwf instead

* docs: remove pilot

* docs: address suggestions from DB and SBS

* docs: add link to zenodo snapshot

* docs: fix zenodo doi and add badges