Commit e376ff54 authored by Santiago Marco-Sola's avatar Santiago Marco-Sola
Browse files

Adjusted BAND for banded Smith-Waterman

parent 59afb03e
...@@ -65,9 +65,13 @@ typedef struct { ...@@ -65,9 +65,13 @@ typedef struct {
// SELECT INPUT, REPETITIONS, AND BAND-WIDTH HERE // SELECT INPUT, REPETITIONS, AND BAND-WIDTH HERE
#define REPS 1 #define REPS 1
#define SW_BANDWIDTH 80 #define SW_BANDWIDTH 10
//#define SW_BANDWIDTH 20
//#define SW_BANDWIDTH 30
#include "data/sequences.n10K.l100.h" #include "data/sequences.n10K.l100.h"
//#define SW_BANDWIDTH 500 //#define SW_BANDWIDTH 100
//#define SW_BANDWIDTH 200
//#define SW_BANDWIDTH 300
//#include "data/sequences.n1K.l1K.h" //#include "data/sequences.n1K.l1K.h"
// Memory // Memory
......
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