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T
Text Mining
Bio Tools
cdisc-etox-annotation
Commits
fd4482e8
Commit
fd4482e8
authored
Aug 21, 2020
by
jcorvi
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Update docker-build.sh
parent
09db99c9
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docker-build.sh
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docker-build.sh
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fd4482e8
...
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@@ -34,11 +34,11 @@ cd ..
#rename jar
mv
nlp-gate-generic-component/target/nlp-gate-generic-component-0.0.1-SNAPSHOT-jar-with-dependencies.jar nlp-gate-generic-component-
${
CDISC_ETOX_TAGGER_VERSION
}
.jar
cat
>
/usr/local/bin/cdisc-etox-annotat
ion
<<
EOF
cat
>
/usr/local/bin/cdisc-etox-annotat
or
<<
EOF
#!/bin/sh
exec java
\$
JAVA_OPTS -jar "
${
CDISC_ETOX_TAGGER_HOME
}
/nlp-gate-generic-component-
${
CDISC_ETOX_TAGGER_VERSION
}
.jar" -workdir "
${
CDISC_ETOX_TAGGER_HOME
}
" -l dictionaries/lists.def -j jape_rules/main.jape "
\$
@"
EOF
chmod
+x /usr/local/bin/cdisc-etox-annotat
ion
chmod
+x /usr/local/bin/cdisc-etox-annotat
or
#delete target, do not delete for now because it has the jape rules inside
#rm -R nlp_generic_annotation
...
...
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