Merge branch 'develop' of...

Merge branch 'develop' of https://gitlab.bsc.es/inb/etransafe/etransafe-text-mining-pipeline.git into develop
1 job for develop in 3 seconds (queued for 2 seconds)
Status Job ID Name Coverage
  Run
failed #107694
build
run_text_mining_pipeline

00:00:03

 
Name Stage Failure
failed
run_text_mining_pipeline Run
WARN: Access to undefined parameter `paramsout` -- Initialise it to a default value eg. `params.paramsout = some_value`
[Config Wrapper] Saving current parameters to /home/jcorvi/eTRANSAFE_DATA/workshop_data/gitlab-ci/28-09-2020/execution-results/params_pretox_pipeline_28-09-2020_11_09_55.json
This file can be used to input parameters providing
'-params-file "/home/jcorvi/eTRANSAFE_DATA/workshop_data/gitlab-ci/28-09-2020/execution-results/params_pretox_pipeline_28-09-2020_11_09_55.json"'
to nextflow when running the workflow.
ERROR ~ No such file: /home/jcorvi/eTRANSAFE_DATA/workshop_data/gitlab-ci/28-09-2020/execution-results/params_pretox_pipeline_28-09-2020_11_09_55.json

-- Check script 'pipeline.nf' at line: 226 or see '.nextflow.log' file for more details
ERROR: Job failed: exit status 1