Update pipeline.nf

1 job for delete in 3 seconds (queued for 1 second)
Status Job ID Name Coverage
  Run
failed #107693
build
run_text_mining_pipeline

00:00:03

 
Name Stage Failure
failed
run_text_mining_pipeline Run
WARN: Access to undefined parameter `paramsout` -- Initialise it to a default value eg. `params.paramsout = some_value`
[Config Wrapper] Saving current parameters to /home/jcorvi/eTRANSAFE_DATA/workshop_data/pipeline_test/28-09-2020/execution-results/params_pretox_pipeline_28-09-2020_11_08_03.json
This file can be used to input parameters providing
'-params-file "/home/jcorvi/eTRANSAFE_DATA/workshop_data/pipeline_test/28-09-2020/execution-results/params_pretox_pipeline_28-09-2020_11_08_03.json"'
to nextflow when running the workflow.
ERROR ~ No such file: /home/jcorvi/eTRANSAFE_DATA/workshop_data/pipeline_test/28-09-2020/execution-results/params_pretox_pipeline_28-09-2020_11_08_03.json

-- Check script 'pipeline.nf' at line: 227 or see '.nextflow.log' file for more details
ERROR: Job failed: exit status 1