Commit e78d480c authored by jcorvi's avatar jcorvi

Update run_gitlab-runner.sh

parent affac9b9
......@@ -31,9 +31,9 @@ db_port=xxxxx
db_user=xxxxx
db_password=xxxxx
#set the database name
db_name=xxxxxx
db_name=etransafe
#set the collection prefix
db_collection_prefix=xxxxx
db_collection_prefix=dev
db_uri="mongodb://127.0.0.1:27018"
#command
$nextflow_path run $pipeline_path --inputDir $input_dir --baseDir $base_dir --db_uri $db_uri --db_name $db_name --db_collection_prefix $db_collection_prefix -with-report $base_dir/report.html -with-trace -with-timeline $base_dir/timeline.html -name $pipeline_name
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