Commit e4eec2cd authored by jcorvi's avatar jcorvi

Update run_gitlab-runner.sh

parent 3757c852
Pipeline #12392 failed with stage
in 3 minutes and 2 seconds
......@@ -38,6 +38,9 @@ db_uri="mongodb://127.0.0.1:27018"
#command
$nextflow_path run $pipeline_path --inputDir $input_dir --baseDir $base_dir --db_uri $db_uri --db_name $db_name --db_collection_prefix $db_collection_prefix -with-report $base_dir/report.html -with-trace -with-timeline $base_dir/timeline.html -name $pipeline_name
cp $base_dir/report.html report.html
git config user.email "javier.corvi@bsc.es"
git config user.name "CI Pipeline"
git config --global http.sslverify "false"
git branch
echo $CI_COMMIT_REF_NAME
git add report.html
......
Markdown is supported
0% or
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment