***nlp-gate-generic-component**: Text mining GATE generic component for run in Batch/Pipeline mode using software containers (dockers). This tool execute the Default Gazetteer or Flexible Gazetteer Lookup given dictionaries passed as parameters and, in a second stage, execute JAPE rules given a main.jape file. This component is instantiated by other specific domain modules.
***nlp-standard-preprocessing**: dockerization of stanford corenlp preprocessing tasks; sentence splitting, tokenization, part of speech (POS), other features: word types, lemma, kinds, formats, length and masks.
***import-json-to-mongo**: this component inserts and push json files into a mongo database.
### (Text Mining - Bio Tools GitLab Group) https://gitlab.bsc.es/inb/text-mining/bio-tools
***hepatotoxicity-annotation**: This library annotated text with hepatotoxicity terms related to liver findings, liver markers and CYPs genes that are relevant in hepatotoxicity events. It uses data that were obtained in a previous work: The LIMTOX system http://limtox.bioinfo.cnio.es/. Is an instance of nlp-gate-generic-component.
***cdisc-etox-annotation**: This component annotated text using CDISC SEND and eTOX (OntoBrowser) terminologies. These terminologies are oriented to the preclinical study reports. Is an instance of nlp-gate-generic-component.
***dnorm-gate-wrapper**: This component is a Gate wrapper of the Dnorm application (Diseases Tagger). Could be easily downloaded and run as a docker container.
***linnaeus-gate-wrapper**: This component is a Gate wrapper of the Linnaeus application (Species Tagger). Could be easily downloaded and run as a docker container.
