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BSC workflow manager and molecular visualizer

Official EAR project.

Variant Interaction Analysis (VIA) is an application for identifying genomic variant interactions related with complex diseases. It uses Multifactor Dimensionality Dimension (MDR), a non-parametric statistical method for detecting and characterizing nonlinear interactions. It runs in a singularity container using Apache Spark for distributing the work, Hadoop File System for distributing the data and Apache ZooKeeper for synchronization. It is coded in Python.

Pre- and Post-processing tools

Documentation for the reference implementation provided by IMPaCT-Data, to be published in the ReadTheDocs platform

Project to light a Beacon v2 on top of a OMOP CDM instance

Inherits from original updated tkdnn from ceccocats