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  • EAR_team / EAR

    Official EAR project.

    Topics: singularity python high-perform...
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  • DataCentric-Computing / VIA

    Variant Interaction Analysis (VIA) is an application for identifying genomic variant interactions related with complex diseases. It uses Multifactor Dimensionality Dimension (MDR), a non-parametric statistical method for detecting and characterizing nonlinear interactions. It runs in a singularity container using Apache Spark for distributing the work, Hadoop File System for distributing the data and Apache ZooKeeper for synchronization. It is coded in Python.

    Topics: genomics visualization spark
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