Commit 248c89aa authored by amunoz's avatar amunoz
Browse files

Param added to nextflow.config

parent ff2fff6a
...@@ -22,7 +22,8 @@ params { ...@@ -22,7 +22,8 @@ params {
samples = "data/samples_test.txt" samples = "data/samples_test.txt"
bed = "data/gencode.v19.genes.v7_model.patched_contigs.gtf.bed.*" bed = "data/gencode.v19.genes.v7_model.patched_contigs.gtf.bed.*"
blacklist = "data/hg19-blacklist.v2.num.bed.gz" blacklist = "data/hg19-blacklist.v2.num.bed.gz"
tbi = "data/gencode.v19.genes.v7_model.patched_contigs.gtf.bed.gz.tbi"
//scripts //scripts
manta_filter_script = "templates/manta_filter.sh" manta_filter_script = "templates/manta_filter.sh"
gridss_filter_script = "templates/gridss_filter.sh" gridss_filter_script = "templates/gridss_filter.sh"
......
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