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amunoz
structuralvariants_poc
Commits
248c89aa
Commit
248c89aa
authored
Jun 23, 2022
by
amunoz
Browse files
Param added to nextflow.config
parent
ff2fff6a
Changes
1
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structuralvariants/nextflow/nextflow.config
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248c89aa
...
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@@ -22,7 +22,8 @@ params {
samples
=
"data/samples_test.txt"
bed
=
"data/gencode.v19.genes.v7_model.patched_contigs.gtf.bed.*"
blacklist
=
"data/hg19-blacklist.v2.num.bed.gz"
tbi
=
"data/gencode.v19.genes.v7_model.patched_contigs.gtf.bed.gz.tbi"
//
scripts
manta_filter_script
=
"templates/manta_filter.sh"
gridss_filter_script
=
"templates/gridss_filter.sh"
...
...
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