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amunoz
structuralvariants_poc
Commits
05efb875
Commit
05efb875
authored
Jun 14, 2022
by
lrodrig1
Browse files
added emit to ouput of bwa_index.nf
parent
fb76c9c7
Changes
1
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structuralvariants/nextflow/modules/bwa_index.nf
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05efb875
process BWA_INDEX {
tag "bwa index"
tag
{
"bwa index"
}
container 'quay.io/biocontainers/bwa:0.7.17--h84994c4_5'
input:
path input
output:
path "*.{amb,ann,bwt,pac,sa}"
path "*.{amb,ann,bwt,pac,sa}"
, emit: indexs
script:
def algoType = params.algoType ? "-a $params.algoType" : ""
"""
bwa index $algoType $input
"""
}
\ No newline at end of file
}
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