amunoz (a5daaac5) at 30 Jun 09:40
Removed scripts from inputs and updated templates
... and 1 more commit
amunoz (b21e4d3d) at 27 Jun 13:05
Updated merge_all script and final_filtering subworkflow
amunoz (9647b0bf) at 23 Jun 14:55
Merge branch 'master' of https://gitlab.bsc.es/amunoz/structuralvar...
... and 1 more commit
amunoz (248c89aa) at 23 Jun 14:32
Param added to nextflow.config
amunoz (ff2fff6a) at 23 Jun 10:24
Params added to cnv_gridss
amunoz (e6f71ceb) at 23 Jun 10:13
Param added to cnv_gridss
amunoz (9f6f3a6f) at 23 Jun 08:47
Merge branch 'master' of https://gitlab.bsc.es/amunoz/structuralvar...
... and 7 more commits
amunoz (aef7ba2b) at 22 Jun 13:35
gridss updated
amunoz (29cdf23e) at 22 Jun 10:21
gunzip added
amunoz (715c514b) at 22 Jun 10:18
Add gunzip to bwa_index
amunoz (d349f9ae) at 21 Jun 15:31
Manta, svtools and manta_filter fix
amunoz (7ffd0851) at 20 Jun 18:18
Update manta
amunoz (5cdd0e69) at 16 Jun 16:37
Updated bwa_index
amunoz (3d20b78c) at 16 Jun 16:32
read_group as optional parameter
amunoz (c04f543d) at 14 Jun 09:10
Merge branch 'master' of https://gitlab.bsc.es/lrodrig1/structuralv...
... and 6 more commits
amunoz (c702b675) at 13 Jun 14:11
If the reference_genome is compressed, uncompress it
... and 14 more commits
amunoz (def4d846) at 24 May 09:23
Subworkflows picard and bam_filtering works
amunoz (18d73f8f) at 20 May 12:37
samtools processes terminated